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International Symposium on |
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| PROGRAMME | |||||
| Tuesday 19th August 2008 | |||||
| 13:00 - 17:30 | Pre-Symposium Meeting - Data Integration Software tutorial (requires a seperate registration) |
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| Wednesday 20th August 2008 | |||||
| 11:00 | Symposium registration desk opens | ||||
| 12:00 | Buffet lunch | ||||
| 13:00 | Welcome F. Schreiber (IPK Gatersleben, Germany) |
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| 1st Session: Data Integration and Integrative Databases | |||||
| 13:10 keynote |
Karp, Peter A Comprehensive Schema for Bioinformatics Data Integration (SRI International, USA) |
14:00 | Baumbach, Jan MoRAine - A web server for fast computational transcription factor binding motif re-annotation (Center for Biotechnology, Bielefeld University, Germany) |
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| 14:30 | Belmamoune, Mounia Data Integration for Spatio-Temporal Patterns of Gene Expression of Zebrafish development: the GEMS database (Leiden University, The Netherlands) |
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| 15:00 | Coffee break | ||||
| 15:30 | Töpel, Thoralf BioDWH: A Data Warehouse Kit for Life Science Data Integration (Bielefeld University, Germany) |
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| 16:00 | Taubert, Jan Graph-based sequence annotation using a data integration approach (Rothamsted Research, UK) |
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| 16:30 - 18:30 Seminar Room 1 & 2 |
Poster Session | ||||
| 16:30-18:30 | Software demonstrations Audimax |
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| 16:30 | V. A. Ivanisenko, E. E. Yarkova, P. S. Demenkov and A. V. Kochetov ANDCell: a tool for automated knowledge extraction from PubMed and reconstruction of association networks | ||||
| 17:10 | R. Smith, S. Contrino, H. Janssens, J. Kulaviak, R. Lyne, K. Rutherford, J. Sullivan, D. Tomlinson, M. Wakeling, X. Watkins and G. Micklem InterMine: open source data warehouse and query interface | ||||
| 17:50 | A. Joecker, A. Groscurth, F. Hoffmann and H. Schoof AFAWE: Automatic and Manual Functional Annotation in a distibuted Web Service Environment | ||||
| Thursday 21st August 2008 | |||||
| 2nd Session: Integrative Data Analysis and Interpretation | |||||
| 09:00 keynote |
Schomburg, Dietmar Experiment and Bioinformatics in Systems Biology (Technical University Braunschweig, Germany) |
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| 09:50 | Sun, Yudong Converting Biomolecular Modelling Data based on an XML Representation (University of Oxford, UK) |
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| 10:20 | Kwok Yip, Szeto Effectiveness of Closure of Public Places with Time Delay in Disease Control (Physics Dept. HKUST, Hong Kong, People’s Republic of China) |
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| 10:50 | Coffee break | ||||
| 11:15 | Borowski, Krzysztof Visual Comparison of Multiple Gene Expression Datasets in a Genomic Context (University of Calgary, Canada) |
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| 11:45 | Harrison, Andrew P. Widespread existence of uncorrelated probe intensities from within the same probeset on Affymetrix GeneChips (University of Essex, UK) |
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| 12:15 | Buffet lunch | ||||
| 13:00 | Guided Tour through the World Heritage City Wittenberg | ||||
| 3rd Session: Network Analysis | |||||
| 15:50 | Yuan, Yinyin A Bayes Random Field Approach for Integrative Large-Scale Regulatory Network Analysis (University of Warwick, UK) |
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| 16:20 | Eronen, Lauri Subgraph Queries by Context-free Grammars (University of Helsinki, Finland) |
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| 16:50 | Coffee break | ||||
| 17:15 | Emig, Dorothea Integrative Visual Analysis of the Effects of Alternative Splicing on Protein Domain Interaction Networks (Max Planck Institute for Informatics, Germany) |
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| 17:45 | Åkerlung, Arto ReMatch: a web-based tool to construct, store and share stoichiometric metabolic models with carbon maps for metabolic flux analysis (University of Helsinki, Finland) |
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| 18:15 - 19:00 | Poster Session Seminar Room 1 & 2 |
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| 18:15 | Software demonstration Audimax |
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| 18:15 | P. Karp Integration of Metabolism, Genomics, and Regulation in Pathway Tools | ||||
| 19:30 | Conference Dinner “Brauhaus Wittenberg” | ||||
| Friday 22nd August 2008 | |||||
| 4th Session: Data Mining | |||||
| 09:00 keynote |
Thiele, Herbert Chemometric Approaches Based On MS/NMR Data For Metabolic Profiling (Bruker Daltonik Germany) |
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| 09:50 | Mitra, Chanchal An Unusual Distribution of 6-nt Sequences Near The Transcription Start Site (University of Hyderabad, India) |
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| 10:20 | Groth, Detlef GOblet: Annotation of anonymous sequence data with Gene Ontology and Pathway terms (Potsdam University, Germany) |
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| 10:50 | Coffee break | ||||
| 11:20 | Teng , Li Discovering Distinct Patterns in Gene Expression Profiles (The Chinese University of Hong Kong, People’s Republic of China) |
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| 11:50 | Niranjan, Mahesan Mining Protein Databases using Machine Learning Techniques (University of Sheffield, UK) |
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| 12:20 | Final remarks | ||||
| 12:30 | Buffet lunch and then Depart | ||||
| Comments on the content and suggestions for improvements to these pages are always welcome. Webmaster: Paul.Verrier@bbsrc.ac.uk. |